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Top level overview of the AIS repositories

    In each case, we recommend raising issue tickets within the repository in question.

    XNAT-build

    This repository builds an XNAT 1.7.6 instance in docker or linux containers (lxd). This is suitable for local deployments.

    Code: xnat-build

    Charts

    This is an alternative deployment process utilising Helm and Kubernetes. This is suitable for cloud deployments.

    Code: charts

    XNATUtils

    Xnat-utils is a collection of scripts for conveniently up/downloading and listing data on/from XNAT based on the XnatPy package.

    Code: xnatutils

    Pipelines - Core

    Core pipelines for the Australian Imaging Service

    Code: pipelines-core

    Pipelines - Community

    Community contributed pipelines for the Australian Imaging Service

    Code: pipelines-community

    Arcana

    Abstraction of Repository Centric ANAlysis

    Code: arcana

    XNAT OpenID Connect Authentication Provider Plugin

    Code: openid-auth-plugin

    s3fs-build

    A side container to mount Amazon S3 storage in a docker container’s filesystem.

    Code: s3fs-build

    qc-pipelines

    A collection of QA pipelines for assessing quality biomedical images

    Code: qc-pipelines

    CTP-build

    Clinical Trials Processor (CTP) is used for processing images from clinical trials. XNAT utilises CTP for anonymisation.

    Code: ctp-build

    xnat-openid-auth-plugin

    Provides AAF authentication in particular.

    Code: xnat-openid-auth-plugin